MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Rothia nasimurium 19428wA5_irhom_31

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 127

bases: 2,688,339 bps

CDS: 2,489

rRNA: 6

Repeat region:

tmRNA: 1

tRNA: 55

misc RNA:

Total features: 2,551

Total number of protein coding genes annotated/found: 2,489

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Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5043\|JADGLK010000089.1	SEQF5043_02402	NA AA	624/208	563-1186	hypothetical protein
SEQF5043\|JADGLK010000089.1	SEQF5043_02403	NA AA	171/57	1456-1286	hypothetical protein
SEQF5043\|JADGLK010000077.1	SEQF5043_02293	NA AA	636/212	679-44	Pyridoxal 5'-phosphate synthase subunit PdxT
SEQF5043\|JADGLK010000077.1	SEQF5043_02294	NA AA	918/306	1596-679	Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5043\|JADGLK010000077.1	SEQF5043_02295	NA AA	633/211	2110-2742	hypothetical protein
SEQF5043\|JADGLK010000077.1	SEQF5043_02296	NA AA	687/229	2858-3544	Glucan endo-1%2C3-beta-glucosidase A1
SEQF5043\|JADGLK010000060.1	SEQF5043_02077	NA AA	504/168	221-724	hypothetical protein
SEQF5043\|JADGLK010000060.1	SEQF5043_02078	NA AA	663/221	1119-1781	hypothetical protein
SEQF5043\|JADGLK010000060.1	SEQF5043_02079	NA AA	693/231	2611-1919	hypothetical protein
SEQF5043\|JADGLK010000060.1	SEQF5043_02080	NA AA	444/148	2774-3217	Putrescine oxidase
SEQF5043\|JADGLK010000060.1	SEQF5043_02081	NA AA	909/303	3295-4203	Putrescine oxidase
SEQF5043\|JADGLK010000060.1	SEQF5043_02082	NA AA	807/269	4304-5110	Universal stress protein
SEQF5043\|JADGLK010000060.1	SEQF5043_02083	NA AA	1548/516	5332-6879	Putrescine importer PuuP
SEQF5043\|JADGLK010000060.1	SEQF5043_02084	NA AA	1488/496	7023-8510	Succinate-semialdehyde dehydrogenase
SEQF5043\|JADGLK010000060.1	SEQF5043_02085	NA AA	1347/449	8619-9965	4-aminobutyrate aminotransferase
SEQF5043\|JADGLK010000060.1	SEQF5043_02086	NA AA	1377/459	9977-11353	Succinate-semialdehyde dehydrogenase [NADP(+)] 1
SEQF5043\|JADGLK010000085.1	SEQF5043_02394	NA AA	477/159	170-646	hypothetical protein
SEQF5043\|JADGLK010000085.1	SEQF5043_02395	NA AA	957/319	639-1595	hypothetical protein
SEQF5043\|JADGLK010000056.1	SEQF5043_01949	NA AA	222/74	1-222	hypothetical protein
SEQF5043\|JADGLK010000056.1	SEQF5043_01950	NA AA	717/239	1161-445	putative HTH-type transcriptional regulator RhmR

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Page last updated: July 7, 2021 08:39:35